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Computing Research Publications and Presentations


    2014 Publications and Presentations
  • Baldwin, Charlie H., Matthew Grace, Ivan H. Deutsch, ""The role of the global phase in optimal quantum control to implement partial isometries"," Workshop Paper, Southwest Quantum Information and Technology Workshop, Sante Fe, NM, February 2014.
  • Ballard, Grey, James Demmel, Laura Grigori, Mathias Jacquelin, Hong Diep Nguyen, Edgar Solomonik, "Reconstructing Householder Vectors from TSQR," Presentation, Siam Conference on Parallel Processing for Scientific Computer; Portland, OR, February 2014.
  • Ballard, Grey, James Demmel, Laura Grigori, Mathias Jacquelin, Hong Diep Nguyen, Edgar Solomonik, "Reconstructing Householder Vectors from TSQR," Presentation, The Matrix Computations Seminar (UC Berkeley) , February 2014.
  • Ballard, Grey, James Demmel, Laura Grigori, Mathias Jacquelin, Hong Diep Nguyen, Edgar Solomonik, "Reconstructing Householder Vectors from TSQR," Presentation, The University of Texas, Austin, March 2014.
  • Basagni, Stefano, Ladislau Boloni, Petrika Gjanci, Chiara Petrioli, Cynthia A Phillips, Damla Turgut, "Maximizing the value of sensed information in underwater wireless sensor networks via an autonomous underwater vehicle," Conference Paper, 33rd Annual IEEE International Conference on Computer Communications (INFOCOM), April 2014.
  • Bennett, Janine, Hemanth Kolla, Keita Teranishi, Jeremiah Wilke, Nicole Slattengren, John Floren, "Extreme-scale viability of collective communication for resilient task scheduling and work stealing -- accepted.," Workshop Paper, Fault Tolerance for HPC at eXtreme Scale (FTXS) Workshop, September 2014.
  • Bennett, Janine Camille, Jeremiah J Wilke, Hemanth Kolla, Keita Teranishi, John Frank Floren, Nicole Lemaster Slattengren, "Extreme-scale viability of collective communication for resilient task scheduling and work stealing," Workshop Paper, to appear in Proceedings Fault Tolerance for HPC at eXtreme Scale (FTXS) Workshop" , April 2014.
  • Berry, Jonathan W, Luke K. Fostvedt, Daniel J Nordman, Cynthia A Phillips, C Seshadhri, Alyson G Wilson, "Why do simple algorithms for triangle enumeration work in the real world?," Conference Paper, 5th Innovations in Theoretical Computer Science Conference, January 2014.
  • Berry, Jonathan W., Luke Fostvedt, Daniel Nordman, Cynthia A. Phillips, Seshadhri Comandur, Alyson Wilson, "Why do Simple Algorithms for Triangle Enumeration work in the Real World?," Conference Paper, Innovations in Theoretical Computer Science, January 2014.
  • Blaylock, Myra L., Cosmin Safta, Jeremy Alan Templeton, "“Rigorous LES Assessment for Predictive Simulations”," Poster, PESP Review, April 2014.
  • Bochev, Pavel, Mauro Perego, Kara Peterson, "FORMULATION AND ANALYSIS OF A PARAMETER-FREE STABILIZED FINITE ELEMENT METHOD," Journal Article, SIAM J. Numerical Analysis, Submitted March 2014.
  • Bochev, Pavel, Marc Gerritsma, "A SPECTRAL MIMETIC LEAST-SQUARES METHOD," Journal Article, Computers and Mathematics with Applications, Submitted March 2014.
  • Brost, Randy C, Cynthia A. Phillips, David G. Robinson, David J Stracuzzi, Diane Myung-kyung Suh, "Computing Quality Scores and Uncertainty for Approximate Pattern Matching in Geospatial Semantic Graphs," Poster, 2014 Conference on Data Analysis (CoDA), March 2014.
  • Brost, Randy C, Mark Kaiser, Daniel J Nordman, Cynthia A Phillips, David G Robinson, David J Stracuzzi, Diane Myung-Kyung Suh, Alyson G Wilson, "Approximate Pattern Matching under Uncertainty in Geospatial Semantic Graphs," Presentation, Conference on Data Analysis, March 2014.
  • Carlberg, Kevin Thomas, "“Adaptive h-refinement for reduced-order models,” arXiv e-Print 1404.0442," Journal Article, International Journal for Numerical Methods in Engineering, Special Issue on Model Reduction, Accepted/Published April 2014.
  • Carlberg, Kevin Thomas, Raymond S. Tuminaro, P. Boggs, "“Preserving Lagrangian structure in nonlinear model reduction with application to structural dynamics,” arXiv e-Print 1401.8044," Journal Article, SIAM Journal on Scientific Computing, Submitted April 2014.
  • Chen, Qiushi, Jakob T. Ostien, Glen A. Hansen, "Development of a Used Fuel Cladding Damage Model Incorporating Circumferential and Radial Hydride Responses," Journal Article, Journal of Nuclear Materials, Accepted/Published January 2014.
  • Chen, Qiushi, Jakob T. Ostien, Glen A. Hansen, "Forward Automatic Differentiation for Numerically Exact Computation of Tangent Operators in Small- and Large-Deformation Computational Inelasticity," Conference Paper, Supplemental UE: TMS 2014 Conference Proceedings, February 2014.
  • Collis, Samuel Scott, "Math and Computer Science at Sandia," Presentation, Seminar at Pacific Northwest National Laboratory, March 2014.
  • Comandur, Seshadhri, Jan Vondrak, "Is submodularity testable?," Journal Article, Algorithmica, Accepted/Published March 2014.
  • Crowell, Jeffrey A. W., Patricia D. Hough, "“W80 Abnormal Mechanical Nuclear Safety V&V and QMU”," SAND Report, January 2014.
  • Dalbey, Keith, Laura P Swiler, "Gaussian Process Adaptive Importance Sampling," Journal Article, International Journal for Uncertainty Quantification, Vol. 4, No. 2, pp. 133–149, Accepted/Published March 2014.
  • Debusschere, Bert, Khachik Sargsyan, Francesco Rizzi, Karla Vanessa Morris, Cosmin Safta, Habib N. Najm, O. Knio, "“Probabilistic Approaches for Fault-Tolerance and Scalability in Extreme-Scale Computing”," Presentation, SIAM Parallel Processing, Portland, OR, February 2014.
  • Ebeida, Mohamed S, Anjul Patney, Scott A Mitchell, Keith R Dalbey, Andrew A Davidson, John D Owens, "k-d Darts: Sampling by k-Dimensional Flat Searches," Journal Article, Transactions on Graphics, Vol. 33, No. 1, pp. 3:1–3:16, Accepted/Published January 2014.
  • Ebeida, Mohamed Salah, Scott A. Mitchell, Anjul Patney, Andrew A Davidson, Stanley Tzeng, Muhammad A Awad, Ahmed H Mahmoud, John D. Owens, "Exercises in High-Dimensional Sampling: Maximal Poisson-disk Sampling and k-d Darts," Book, Topological and Statistical Methods for Complex Data - Tackling Large-Scale, High-Dimensional, and Multivariate Data Sets, December 2014.
  • Eric T, Phipps,, Harold C. Edwards, Jonathan J. Hu, Jakob Ostien, "Exploring Emerging Manycore Architectures for Uncertainty Quantification Through Embedded Stochastic Galerkin Methods," Presentation, SIAM Conference on Uncertainty Quantification, March 2014.
  • Eric T, Phipps,, "Uncertainty Quantification Challenges in High-Performance Scientific Computing," Presentation, SIAM Conference on Uncertainty Quantification, March 2014.
  • Gao, Xujiao, Denis Mamaluy, Erik Nielsen, Ralph W. Young, Amir Shirkhorshidian, Michael Lilly, Nathaniel Bishop, Malcolm S. Carroll, Richard P. Muller, "Efficient self-consistent quantum transport simulator for quantum devices.," Journal Article, Journal of Applied Physics, Vol. 115, p. 133707, Accepted/Published January 2014.
  • Gao, Xujiao, Denis Mamaluy, "Quantum Transport Simulation and Optimization of Below-6-nm FinFETs with HfSiON/SiO2 Gate Dielectrics," Presentation, International Conference on Superlattices, Nanostructures, and Nanodevices , August 2014.
  • Groth, Katrina, Curtis Smith, Laura P Swiler, "A Bayesian method for using simulator data to enhance human error probabilities assigned by existing HRA methods," Journal Article, Reliability Engineering and System Safety, Accepted/Published April 2014.
  • Gupta, Rishi, Tim Roughgarden, Seshadhri Comandur, "Decompositions of Triangle-Dense Graphs," Conference Paper, Innovations in Theoretical Computer Science, January 2014.
  • Haass, Michael J, Mark Van Benthem, Edward M Ochoa, Kristina Rodriguez Czuchlewski, "Leveraging the Absence of Observations: Pattern Recognition in Spatiotemporal Behavioral Data for Site and Purpose Discovery," Poster, Conference on Data Analysis, March 2014.
  • Heath, Zach, Ann Hammer, Charles Joseph John, Karim Magdi Mahrous, Jalal Mapar, Steven Anthony Mier, Stephen Mueller, Todd Plantenga, Andrew J. Rothfuss, Nerayo P Teclemariam, Lynn I. Yang, Ann S. Yoshimura, "“Automated User Interface Generation for Dynamically Integrated Simulations in the SUMMIT Framework"," Conference Paper, MODSIM World Conference (MODSIM) Hampton, Virginia, April 2014.
  • Hjalmarson, Harold P., Michael Lee McLain, Denis Mamaluy, Xujiao Gao, "Memristor Physics Driven by Joule Heating," Presentation, American Physical Society March Meeting , March 2014.
  • Hocker, D., Constantin Brif, Matthew Grace, A. Donovan, T.S. Ho, K. W. Moore Tibbetts, R. B. Wu, H. Rabitz, ""Characterization of control noise effects in optimal quantum unitary dynamics"," Journal Article, Phys. Rev. A , Submitted April 2014.
  • Hoyer, Stephan, Filippo Caruso, Simone Montangero, Mohan Sarovar, Tomasso Calarco, Martin B. Plenio, K. Brigitta Whaley, "Realistic and verifiable coherent control of excitonic states in a light harvesting complex," Journal Article, New J. Phys., 16, 045007 , Accepted/Published April 2014.
  • Hukerikar, Saurabh, Keita Teranishi, Pedro C. Diniz, Robert F. Lucas, "Opportunistic Application-level Fault Detection through Adaptive Redundant Multithreading," Conference Paper, Submitted to The 2014 International Conference on High Performance Computing & Simulation (HPCS2014), Bologna, Italy, July 2014.
  • Hulette, Geoffrey Compton, Robert C. Armstrong, Jackson Mayo, Joseph Ruthruff, ""Theorem-Proving Analysis of Digital Control Logic Interacting with Continuous Dynamics"," Conference Paper, 7th International Workshop on Numerical Software Verification, 26th International Conference on Computer Aided Verification, Vienna, Austria, April 2014.
  • Jha, M., C. Seshadhri, A. Pinar, "A space efficient streaming algorithm for estimating transitivity and triangle counts using the birthday paradox," Journal Article, ACM T. on Knowledge Discovery from Data, Submitted May 2014.
  • Johannesson, Gardar, Donald Lucas, Yun Qian, Laura P Swiler, Timothy M Wildey, "Sensitivity of Precipitation to Parameter Values in the Community Atmosphere Model Version 5," SAND Report, March 2014.
  • Kalashnikova, Irina, Andrew G. Salinger, Mauro Perego, Raymond Tuminaro, John Jakeman, Michael Eldred, "FELIX: the Albany Ice Sheet Modeling Code," Presentation, Albany User Group Meeting, January 2014.
  • kalashnikova, Irina, Bart G. van Bloemen Waanders, Srinivasan Arunajatesan, Matthew F. Barone, "Stabilization of Projection-Based Reduced Order Models for Linear Time-Invariant Systems via Optimization-Based Eigenvalue Reassignment," Journal Article, Comput. Meth. Appl. Mech. Engng., Vol. 272, pp. 251–270, Accepted/Published January 2014.
  • Kalashnikova, Irina, Bart G. van Bloemen Waanders, Srinivasan Arunajatesan, Matthew F. Barone, "Stabilized Projection-Based Reduced Order Models for Uncertainty Quantification," Presentation, SIAM Conference on Uncertainty Quantification (UQ), April 2014.
  • Kalashnikova, Irina, Andrew G. Salinger, Mauro Perego, Raymond Tuminaro, Stephen Price, "The Albany/FELIX First-Order Stokes Dycore," Presentation, CESM Land Ice Working Group Meeting, January 2014.
  • Kedia, K., Cosmin Safta, Jaideep Ray, Habib N. Najm, A. Ghoniem, "“A second-order coupled immersed boundary-SAMR construction for chemically reacting flow over heat-conducting Cartesian grid-conforming solid”," Journal Article, Journal of Computational Physics. , Accepted/Published April 2014.
  • Kedia, K., Cosmin Safta, Jaideep Ray, Habib N. Najm, A. Ghoniem, "“A second-order coupled immersed boundary-SAMR construction for chemically reacting flow over heat-conducting Cartesian grid-conforming solid”," Journal Article, Journal of Computational Physics, Accepted/Published April 2014.
  • Kedia, K., Cosmin Safta, Jaideep Ray, Habib N. Najm, A. Ghoniem, "“A second-order coupled immersed boundary-SAMR construction for chemically reacting flow over heat-conducting Cartesian grid-conforming solid”," Journal Article, Journal of Computational Physics, Submitted April 2014.
  • Kolda, T., A. Pinar, T. Plantenga, C. Seshadhri, C. Task, "Counting Triangles in Massive Graphs with MapReduce," Journal Article, to appear in SIAM J. Scientific Computing , Accepted/Published May 2014.
  • Kolda, T. G., J. R. Mayo, "An Adaptive Shifted Power Method for Computing Generalized Tensor Eigenpairs," Journal Article, http://arxiv.org/abs/1401.1183, Accepted/Published January 2014.
  • Kramer, Richard, Pavel Bochev, Christopher Siefert, Thomas Voth, "Algebraically constrained extended edge element method (eXFEM-AC) for resolution of multi-material cells," Journal Article, Journal of Computational Physics, Submitted February 2014.
  • Mamaluy, Denis, Xujiao Gao, Erik Nielsen, Ralph W. Young, A. Shirkhorshidian, Michael Lilly, Nathaniel Bishop, Malcolm S. Carroll, Richard P. Muller, "Efficient self-consistent quantum transport simulator for quantum devices," Journal Article, Journal of Applied Physics, Vol. 115, pp. 133707-1–133707-13, Accepted/Published April 2014.
  • Mamaluy, Denis, Xujiao Gao, Brian David Tierney, "How much time does FET scaling have left?," Presentation, International Conference on Simulation of Semiconductor Processes and Devices (SISPAD), September 2014.
  • Mamaluy, Denis, Xujiao Gao, Brian David Tierney, "The End of FET Scaling Is Near," Presentation, 17th International Workshop on Computational Electronics , June 2014.
  • Marinella, Matthew, Andrew Lohn, Patrick R. Mickel, David Russell Hughart, Robert James Bondi, Denis Mamaluy, James E. Stevens, Seth Decker, Brian Robert Evans, James Bradley Aimone, Fredrick Rothganger, Conrad D. James, Erik Debenedictis, "Development, Characterization, and Modeling of a TaOx ReRAM for a Neuromorphic Accelerator," Abstract, Electrochemical Society 226th Meeting , October 2014.
  • Mitchell, Scott A., "Exploring High Dimensional Spaces with Hyperplane Sampling," Presentation, SIAM Conference on Uncertainty Quantification: UQ14, March 2014.
  • Munoz, Francisco David, Benjamin F. Hobbs, Jonathan L. Ho, Saamrat Kasina, "An Engineering-Economic Approach to Transmission Planning Under Market and Regulatory Uncertainties: WECC Case Study," Journal Article, IEEE Transactions on Power Systems, Vol. 29, No. 1, pp. 307–317, Accepted/Published January 2014.
  • Peng, C., Tamara G. Kolda, Ali Pinar, ""Accelerating Community Detection by Using $k$-core subgraphs"," Conference Paper, submitted to ACM Conference on Knowledge Discovery and Data Mining , April 2014.
  • Peterson, Kara, Pavel Bochev, Denis Ridzal, "Optimization-Based Tracer Transport on the Sphere," Presentation, PDEs on the Sphere Workshop, April 2014.
  • Quinn, C., A. Pinar, N. Kiyavash, "Optimal Bounded-Degree Approximations of Joint Distributions of Networks of Stochastic Processes," Conference Paper, Proc. IEEE International Symposium on Information Theory (ISIT 13), May 2014.
  • Ray, Jaideep, H. Huang, Z. Hou, Laura Painton Swiler, ""Estimation of structural error in the Community Land Model using latent heat observations"," Conference Paper, SIAM Conference on Uncertainty Quantification, Savannah, GA, April 2014.
  • Ray, Jaideep, Jackson Mayo, Robert C. Armstrong, ""Finite Difference Stencils Robust to Silent Data Corruption"," Presentation, SIAM Conference on Parallel Processing for Scientific Computing, Portland, OR, February 2014.
  • Ray, Jaideep, Ali Pinar, Seshadhri Comandur, "A stopping criterion for Markov chains when generating independent random graphs," Journal Article, Complex Networks , Submitted April 2014.
  • Ray, Jaideep, Sophia Lefantzi, Srinivasan Arunajatesan, Lawrence Dechant, "Bayesian calibration of a k-e turbulence model for predictive jet-in-crossflow simulations," Abstract, 44th AIAA Fluid Dynamics Conference, June 2014.
  • Ray, Jaideep, Sophia Lefantzi, Srinivasan Arunajatesan, Lawrence Dechant, "Bayesian calibration of a k-epsilon turbulence model for predictive jet-in-crossflow simulations," Conference Paper, 44th AIAA Fluid Dynamics Conference, Atlanda, GA, April 2014.
  • Riviello, G., Constantin Brif, R. Long, R. B. Wu, K. Moore Tibbetts, T. S. Ho, H. Rabitz, ""Searching for quantum optimal controls in the presence of singular critical points"," Journal Article, Phys. Rev. A, Submitted April 2014.
  • Roch, N., Mollie E. Schwartz, Felix Motzoi, Christopher Macklin, Rajamani Vijay, Andrew W. Eddins, Alexander N. Korotkov, Brigitta Whaley, Mohan Sarovar, Irfan Siddiqi, "Observation of measurement-induced entanglement and quantum trajectories of remote superconducting qubits," Journal Article, Physical Review Letters . arXiv:1402.1868, Submitted February 2014.
  • Rothganger, Fredrick, Christina E. Warrender, Derek Trumbo, James Bradley Aimone, "N2A: a computational tool for modeling from neurons to algorithms," Journal Article, Frontiers in Neural Circuits, Vol. 8, No. 1, Accepted/Published January 2014.
  • Safta, Cosmin, Khachik Sargsyan, Bert Debusschere, Habib N. Najm, "“Bayesian discontinuity detection and surrogate construction for complex computer models”," Presentation, SIAM UQ, Savannah, GA, April 2014.
  • Safta, Cosmin, Khachik Sargsyan, Habib N. Najm, Kamaljit Singh Chowdhary, Bert Debusschere, Laura Painton Swiler, Michael S. Eldred, "“Probabilistic Methods for Sensitivity Analysis and Calibration of Computer Models in the NASA Challenge Problem”," Journal Article, AIAA Journal, Submitted March 2014.
  • Safta, Cosmin, Khachik Sargsyan, Habib N. Najm, Kamaljit Singh Chowdhary, Bert Debusschere, Laura Painton Swiler, Michael S. Eldred, "“Uncertainty Quantification Methods for Model Calibration, Validation, and Risk Analysis”," Journal Article, AIAA Paper 2014-1497, Accepted/Published April 2014.
  • Salloum, M., S. C. James, D. Robinson, "“Effects of Surface Thermodynamics on Hydrogen Isotope Exchange Kinetics in Palladium: Particle and Flow Models”," Journal Article, Chemical Engineering Science, Submitted February 2014.
  • Sargsyan, Khachik, Cosmin Safta, Bert Debusschere, Habib N. Najm, D. Ricciuto, P. Thornton, "“Bayesian Compressive Sensing Framework”," Presentation, SIAM UQ, Savannah, GA, April 2014.
  • Scott, Sarah Nicole, Jeremy Alan Templeton, Joseph Ruthruff, Patricia D. Hough, Jerrod P. Peterson, M. Rosario, "“Computational Solution Verification and Validation Applied to a Thermal Model of a Ruggedized Instrumentation Package”," Journal Article, Computational Methods and Experimental Measurement, Submitted April 2014.
  • Shadid, John N., "An Implicit Stabilized FE Solver for 3D Resistive MHD with an Integrated Adjoint Capability," Presentation, Copper Moutian Conf. on Iterative Methods, Copper Mountain CO, April 6 – 11, 2014, , March 2014.
  • Subbian, K., A. Singhal, T. Kolda, A. Pinar, J. Srivastava, "Dynamics of Trust Reciprocation in Multi-Relational Network," Conference Paper, Proc. the IEEE/ACM International Conference on Social Networks Analysis and Mining (ASONAM~2013)., May 2014.
  • Swiler, Laura P, Patricia D Hough, Peter Qian, Xu Xu, Curtis Storlie, Herbert Lee, "Chapter 21 – Surrogate Models for Mixed Discrete-Continuous Variables," Book, Constraint Programming and Decision Making, January 2014.
  • Swiler, Laura Painton, Patricia D. Hough, P. Qian, X. Xu, C. B. Storlie, H.K.H. Lee, "“Surrogate Models for Mixed Discrete-Continuous Variables”, Springer International Publishing, Switzerland," Journal Article, Constraint Programming and Decision Making, M. Ceberio and V. Kreinovich (eds.), Studies in Computational Intelligence, Vol. 539, pp. 181–202, Accepted/Published April 2014.
  • Tezaur, Radek, Irina Kalashnikova, Charbel Farhat, "Discontinuous Enrichment Method for Variable Wavenumber Medium-Frequency Helmholtz Problems," Journal Article, Comput. Meth. Appl. Mech. Engng., No. 268, pp. 126–140, Accepted/Published January 2014.
  • Turner, Daniel Z., Kalyana B Nakshatrala, "A framework for coupling flow and deformation of the porous solid," Journal Article, International Journal of Geomechanics, Accepted/Published April 2014.
  • Turner, Daniel Z., "A peridynamics based digital image correlation algorithm suitable for cracks and other discontinuities," Journal Article, Journal of Engineering Mechanics, Submitted February 2014.
  • Wilke, Jeremiah J, "Coordination Languages and MPI Perturbation Theory: The FOX Tuple Space Framework for Resilience.," Conference Paper, PDSEC 2014, April 2014.
  • Zhang, Jun, Mohan Sarovar, "Quantum Hamiltonian identification from measurement time traces," Journal Article, Physical Review Letters, Submitted January 2014.
  • Zheng, Ziming, Andrew Chien, Keita Teranishi, "Fault Tolerance in an Inner-outer Solver: A GVR-enabled Case Study (to appear)," Conference Paper, VECPAR14 --- 11th International Meeting on High-Performance Computing for Computational Science, Eugene OR, June 2014.

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